I finished The Legend of Zelda: Phantom Hourglass
tonight. And it was pretty much awesome! I was a little skeptical about the control scheme on the front end - almost entirely touch based without even the option of a traditional layout - but I came around by the end of the first dungeon (yes, it took that
long, but I came around nonetheless). The whole thing really works well on the DS!
I never got around to playing through Wind Waker, but after finishing this one I'm very much tempted to go back and give it a shot. Great game!